PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_010077-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family AP2
Protein Properties Length: 549aa    MW: 59878.7 Da    PI: 6.8672
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_010077-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.6e-11261317155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s y+GV++++++gr++A+++d  +       rk  + g ++ +e+Aa+a++ a++k++g
  AHYPO_010077-RA 261 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEEKAARAYDLAALKYWG 317
                      57*******************4444.2344336655.779999**************98 PP

2AP249.79.4e-16360411155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  AHYPO_010077-RA 360 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 411
                      57****************988532...5************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.53E-15261327IPR016177DNA-binding domain
PfamPF008476.5E-9261317IPR001471AP2/ERF domain
CDDcd000181.65E-20261327No hitNo description
SMARTSM003801.7E-22262331IPR001471AP2/ERF domain
PROSITE profilePS5103217.649262325IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.6E-13262326IPR001471AP2/ERF domain
PRINTSPR003673.9E-6263274IPR001471AP2/ERF domain
CDDcd000185.86E-12360419No hitNo description
PfamPF008474.9E-10360411IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-17360420IPR016177DNA-binding domain
SMARTSM003801.6E-31361425IPR001471AP2/ERF domain
PROSITE profilePS5103219.151361419IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-18361419IPR001471AP2/ERF domain
PRINTSPR003673.9E-6401421IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MAPAAAAGTA SNWLSFSLSP MEMMATSHHH LHHDHHDQTP QILHTPVSNP SSHYFLDPIY  60
TTDWGNQKAN MGMYTDYVVD QHIDNNPPPT MPKLEDFFGG GGGHHHTTSY NSQTETTQDS  120
SSQLTHLYES NHHQNSVPNY YTNTQQQDLK VMTSNLAGFQ AAFSANSGSE VDDSSTTHLS  180
CGGGANGSEF VGHSIESTHH NNELIPSYGS TKSNNNNNNG GSLSLAVVPQ SVEKSVVPVG  240
VGVDSDNSVK KISDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQA RKGRQGGYDK  300
EEKAARAYDL AALKYWGPTA TTNFPISNYS TELEDMKHVT KQEFIASLRR KSSGFSRGAS  360
IYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFATEEEAAE AYDIAAIKFR GVNAVTNFEM  420
NRYDVDAILK SNLPIGGAAK RLKLAAEAAD QKPTLSLEQQ SHSSNGSSGG TSSTINFAAI  480
QSVPAMPYDT ASAIFHQNLF HQLNSNGGAQ AVASDSYASG VSSIVAPMMS LMPQTPAEFY  540
IWPHHQPY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010680360.10.0PREDICTED: AP2-like ethylene-responsive transcription factor AIL6
SwissprotQ52QU21e-154AIL6_ARATH; AP2-like ethylene-responsive transcription factor AIL6
TrEMBLA0A0J8F1500.0A0A0J8F150_BETVU; Uncharacterized protein
STRINGGLYMA01G02760.11e-177(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.21e-130AINTEGUMENTA-like 6